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diff --git a/nikola/data/themes/bootstrap/templates/bootstrap_helper.tmpl b/nikola/data/themes/bootstrap/templates/bootstrap_helper.tmpl
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+++ b/nikola/data/themes/bootstrap/templates/bootstrap_helper.tmpl
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+## Override only the functions that differ from base_helper.tmpl
+<%def name="html_head()">
+    <meta charset="utf-8">
+    %if description:
+    <meta name="description" content="${description}">
+    %endif
+    <meta name="author" content="${blog_author}">
+    <title>${title|striphtml} | ${blog_title|striphtml}</title>
+    ${mathjax_config}
+    %if use_bundles:
+        %if use_cdn:
+            <link href="//netdna.bootstrapcdn.com/twitter-bootstrap/2.3.0/css/bootstrap-combined.min.css" rel="stylesheet">
+            <link href="/assets/css/all.css" rel="stylesheet" type="text/css">
+        %else:
+            <link href="/assets/css/all-nocdn.css" rel="stylesheet" type="text/css">
+        %endif
+    %else:
+        %if use_cdn:
+            <link href="//netdna.bootstrapcdn.com/twitter-bootstrap/2.3.0/css/bootstrap-combined.min.css" rel="stylesheet">
+        %else:
+            <link href="/assets/css/bootstrap.min.css" rel="stylesheet" type="text/css">
+            <link href="/assets/css/bootstrap-responsive.min.css" rel="stylesheet" type="text/css">
+        %endif
+        <link href="/assets/css/rst.css" rel="stylesheet" type="text/css">
+        <link href="/assets/css/code.css" rel="stylesheet" type="text/css">
+        <link href="/assets/css/colorbox.css" rel="stylesheet" type="text/css"/>
+        <link href="/assets/css/theme.css" rel="stylesheet" type="text/css"/>
+        %if has_custom_css:
+            <link href="/assets/css/custom.css" rel="stylesheet" type="text/css">
+        %endif
+    %endif
+    <!--[if lt IE 9]>
+      <script src="http://html5shim.googlecode.com/svn/trunk/html5.js" type="text/javascript"></script>
+    <![endif]-->
+    %if rss_link:
+        ${rss_link}
+    %else:
+        %if len(translations) > 1:
+            %for language in translations:
+                <link rel="alternate" type="application/rss+xml" title="RSS (${language})" href="${_link('rss', None, language)}">
+            %endfor
+        %else:
+            <link rel="alternate" type="application/rss+xml" title="RSS" href="${_link('rss', None)}">
+        %endif
+    %endif
+    %if favicons:
+        %for name, file, size in favicons:
+            <link rel="${name}" href="${file}" sizes="${size}"/>
+        %endfor
+    %endif
+</%def>
+
+<%def name="late_load_js()">
+    %if use_bundles:
+        %if use_cdn:
+            <script src="//ajax.googleapis.com/ajax/libs/jquery/1.10.2/jquery.min.js" type="text/javascript"></script>
+            <script src="//netdna.bootstrapcdn.com/twitter-bootstrap/2.3.0/js/bootstrap.min.js"></script>
+            <script src="/assets/js/all.js" type="text/javascript"></script>
+        %else:
+            <script src="/assets/js/all-nocdn.js" type="text/javascript"></script>
+        %endif
+    %else:
+        %if use_cdn:
+            <script src="//ajax.googleapis.com/ajax/libs/jquery/1.10.2/jquery.min.js" type="text/javascript"></script>
+            <script src="//netdna.bootstrapcdn.com/twitter-bootstrap/2.3.0/js/bootstrap.min.js"></script>
+        %else:
+            <script src="/assets/js/jquery-1.10.2.min.js" type="text/javascript"></script>
+            <script src="/assets/js/bootstrap.min.js" type="text/javascript"></script>
+        %endif
+        <script src="/assets/js/jquery.colorbox-min.js" type="text/javascript"></script>
+    %endif
+</%def>
+
+
+<%def name="html_navigation_links()">
+    %for url, text in navigation_links[lang]:
+        % if isinstance(url, tuple):
+            <li class="dropdown"><a href="#" class="dropdown-toggle" data-toggle="dropdown">${text}<b class="caret"></b></a>
+            <ul class="dropdown-menu">
+            %for suburl, text in url:
+                % if rel_link(permalink, suburl) == "#":
+                    <li class="active"><a href="${suburl}">${text}</a>
+                %else:
+                    <li><a href="${suburl}">${text}</a>
+                %endif
+            %endfor
+            </ul>
+        % else:
+            % if rel_link(permalink, url) == "#":
+                <li class="active"><a href="${url}">${text}</a>
+            %else:
+                <li><a href="${url}">${text}</a>
+            %endif
+        % endif
+    %endfor
+</%def>